Whole genome resequencing of marine medaka: muscle - SRA

SRX27199688: Whole genome resequencing of marine medaka: muscle
1 ILLUMINA (Illumina NovaSeq 6000) run: 28.7M spots, 8.6G bases, 2.8Gb downloads

Design: The DNA fragments underwent end polishing and 3' acetylation, followed by additional PCR amplification. Subsequently, the constructed libraries underwent comprehensive quality and yield assessment using the Agilent 2100 Bioanalyzer and ABI StepOnePlus Real-Time PCR System. The libraries were then sequenced using the Illumina HiSeq platform, generating 150bp paired-end reads with an insert size of approximately 350bp.

Submitted by: Ocean university of China

Study: Evolutionary Phenotypic Traits Adaptations in Marine Medaka (Oryzias melastigma) under Size-Selective Harvesting

PRJNA1203005 • SRP554069 • All experiments • All runs

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Size-selective harvesting has profound evolutionary and ecological implications for fish populations, altering phenotypic traits such as body size, reproductive success, and hatchability, as well as driving significant genetic changes. The population differentiation was analyzed by resequencing.

Sample:

SAMN45967465 • SRS23649875 • All experiments • All runs

Organism: Oryzias melastigma

Library:

Name: SH28

Instrument: Illumina NovaSeq 6000

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 28.7M spots, 8.6G bases, 2.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR31839413	28,701,719	8.6G	2.8Gb	2024-12-27

ID:: 36693021

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Sequence Read Archive

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